Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Smed_0871 | Smed_1406 | Smed_0871 | Smed_1406 | PFAM: phospholipase D/Transphosphatidylase; KEGG: sme:SMc04448 hypothetical protein. | TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMc00233 putative phosphate:Na+ symporter, PNaS family. | 0.479 |
| Smed_1406 | Smed_0871 | Smed_1406 | Smed_0871 | TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMc00233 putative phosphate:Na+ symporter, PNaS family. | PFAM: phospholipase D/Transphosphatidylase; KEGG: sme:SMc04448 hypothetical protein. | 0.479 |
| Smed_1406 | glmU | Smed_1406 | Smed_1405 | TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMc00233 putative phosphate:Na+ symporter, PNaS family. | Nucleotidyl transferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.464 |
| glmU | Smed_1406 | Smed_1405 | Smed_1406 | Nucleotidyl transferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMc00233 putative phosphate:Na+ symporter, PNaS family. | 0.464 |